NAME
gt-sketch - Create graphical representation of GFF3 annotation files.
SYNOPSIS
gt sketch [option …] image_file [GFF3_file …]
DESCRIPTION
- -pipe [yes|no]
-
use pipe mode (i.e., show all gff3 features on stdout) (default: no)
- -flattenfiles [yes|no]
-
do not group tracks by source file name and remove file names from track description (default: no)
- -seqid [string]
-
sequence region identifier default: first one in file
- -start [value]
-
start position default: first region start
- -end [value]
-
end position default: last region end
- -width [value]
-
target image width (in pixel) (default: 800)
- -style [string]
-
style file to use (default: undefined)
- -format […]
-
output graphics format choose from png|pdf|svg|ps (default: png)
- -input […]
-
input data format choose from gff|bed|gtf (default: gff)
- -addintrons [yes|no]
-
add intron features between existing exon features (before drawing) (default: no)
- -unsafe [yes|no]
-
enable unsafe mode for style file (default: no)
- -v [yes|no]
-
be verbose (default: no)
- -force [yes|no]
-
force writing to output file (default: no)
- -help
-
display help and exit
- -version
-
display version information and exit
REPORTING BUGS
Report bugs to https://github.com/genometools/genometools/issues.