NAME
gt-readjoiner-overlap - Compute suffix prefix matches from encoded sequence.
SYNOPSIS
gt readjoiner overlap [option …] [file]
DESCRIPTION
- -readset [string]
-
specify the readset name (default: undefined)
- -l [value]
-
specify the minimum SPM length (default: 0)
- -parts [value]
-
specify the number of parts (default: 0)
- -memlimit [string]
-
specify maximal amount of memory to be used during index construction (in bytes, the keywords MB and GB are allowed) (default: undefined)
- -v [yes|no]
-
be verbose (default: no)
- -q [yes|no]
-
suppress standard output messages (default: no)
- -help
-
display help and exit
- -version
-
display version information and exit
REPORTING BUGS
Report bugs to https://github.com/genometools/genometools/issues.