NAME
gt-matstat - Compute matching statistics.
SYNOPSIS
gt matstat [options …] -query queryfile […]
DESCRIPTION
- -fmi [string]
-
specify fmindex (default: undefined)
- -esa [string]
-
specify suffix array (default: undefined)
- -pck [string]
-
specify packed index (default: undefined)
- -query
-
specify queryfiles
- -min [value]
-
only output length if >= given minimum length (default: 0)
- -max [value]
-
only output length if ⇐ given maximum length (default: 0)
- -output
-
set output flags (sequence, querypos, subjectpos)
- -help
-
display help and exit
- -version
-
display version information and exit
ADDITIONAL INFORMATION
For detailed information, please refer to the manual of matstat.
REPORTING BUGS
Report bugs to <kurtz@zbh.uni-hamburg.de>.