NAME
gt-encseq-info - Display meta-information about an encoded sequence.
SYNOPSIS
gt encseq info [option …] indexname
DESCRIPTION
- -nomap [yes|no]
-
do not map encoded sequence (gives less information) (default: no)
- -mirrored [yes|no]
-
use mirrored encoded sequence (DNA only) (default: no)
- -noindexname [yes|no]
-
do not output index name (default: no)
- -show_alphabet [yes|no]
-
output alphabet definition (default: no)
- -n50 [yes|no]
-
show N50 values (minimum length of largest sequences for covering at least 50% of total sequence length) (default: no)
- -o [filename]
-
redirect output to specified file (default: undefined)
- -gzip [yes|no]
-
write gzip compressed output file (default: no)
- -bzip2 [yes|no]
-
write bzip2 compressed output file (default: no)
- -force [yes|no]
-
force writing to output file (default: no)
- -help
-
display help and exit
- -version
-
display version information and exit
REPORTING BUGS
Report bugs to https://github.com/genometools/genometools/issues.