NAME
gt-encseq2spm - Compute suffix prefix matches from encoded sequence.
SYNOPSIS
gt encseq2spm [option …] [file]
DESCRIPTION
- -l [value]
-
specify the minimum length (default: 0)
- -parts [value]
-
specify the number of parts (default: 0)
- -memlimit [string]
-
specify maximal amount of memory to be used during index construction (in bytes, the keywords MB and GB are allowed) (default: undefined)
- -singlestrand [yes|no]
-
use only the forward strand of the sequence (default: no)
- -spm [string]
-
specify output for spms (default: undefined)
- -ii [string]
-
specify the input sequence (default: undefined)
- -v [yes|no]
-
be verbose (default: no)
- -help
-
display help and exit
- -version
-
display version information and exit
REPORTING BUGS
Report bugs to https://github.com/genometools/genometools/issues.