NAME
gt-bed_to_gff3 - Parse BED file and convert it to GFF3.
SYNOPSIS
gt bed_to_gff3 [BED_file]
DESCRIPTION
- -featuretype [string]
-
Set type of parsed BED features (default: BED_feature)
- -thicktype [string]
-
Set type of parsed thick BED features (default: BED_thick_feature)
- -blocktype [string]
-
Set type of parsed BED blocks (default: BED_block)
- -o [filename]
-
redirect output to specified file (default: undefined)
- -gzip [yes|no]
-
write gzip compressed output file (default: no)
- -bzip2 [yes|no]
-
write bzip2 compressed output file (default: no)
- -force [yes|no]
-
force writing to output file (default: no)
- -help
-
display help and exit
- -version
-
display version information and exit
REPORTING BUGS
Report bugs to https://github.com/genometools/genometools/issues.